About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides44427GAG-RELATED PROTEIN
Paelopatides44428-
Paelopatides44429-
Paelopatides44430-
Paelopatides44431TRANSMEMBRANE CHANNEL-RELATED
Paelopatides44432PARANEOPLASTIC ANTIGEN
Paelopatides44433POL PROTEIN
Paelopatides44434ENDONUCLEASE-RELATED
Paelopatides44435PEPTIDYL-PROLYL CIS-TRANS ISOMERASE
Paelopatides44436NEUROPEPTIDES RECEPTOR
Paelopatides4443726S PROTEASOME NON-ATPASE REGULATORY SUBUNIT 12/COP9 SIGNALOSOME COMPLEX SUBUNIT 4
Paelopatides44438-
Paelopatides44439RABCONNECTIN-3B, ISOFORM A
Paelopatides44440PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN
Paelopatides44441WD-40 REPEAT PROTEIN
Paelopatides4444239S RIBOSOMAL PROTEIN L32, MITOCHONDRIAL
Paelopatides44443PROTEIN CBG26694
Paelopatides44444PARANEOPLASTIC ANTIGEN
Paelopatides44445-
Paelopatides44446-
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