About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides44488M-AAA PROTEASE-INTERACTING PROTEIN 1, MITOCHONDRIAL
Paelopatides44489-
Paelopatides44490-
Paelopatides44491-
Paelopatides44492-
Paelopatides44493-
Paelopatides44494LY6/PLAUR DOMAIN-CONTAINING PROTEIN 6
Paelopatides44495TBP-1 INTERACTING PROTEIN
Paelopatides44496ANK_REP_REGION DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides44497ZINC FINGER RNA-BINDING PROTEIN
Paelopatides44498-
Paelopatides44499LEUCOKININ RECEPTOR-RELATED
Paelopatides44500REVERSE TRANSCRIPTASES
Paelopatides44501WDR41-RELATED
Paelopatides44502ACETYLTRANSFERASE
Paelopatides44503SOLUTE CARRIER FAMILY 34 SODIUM PHOSPHATE , MEMBER 2-RELATED
Paelopatides44504ANK_REP_REGION DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides44505PROTEIN CBG26694
Paelopatides44506PHD-TYPE DOMAIN-CONTAINING PROTEIN
Paelopatides44507PHD-TYPE DOMAIN-CONTAINING PROTEIN
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