About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides44508STG PROTEIN
Paelopatides44509-
Paelopatides44510PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN
Paelopatides44511PIGGYBAC TRANSPOSABLE ELEMENT-DERIVED PROTEIN 4
Paelopatides44512-
Paelopatides44513PIGGYBAC TRANSPOSABLE ELEMENT-DERIVED PROTEIN 4
Paelopatides44514FAS-ASSOCIATING DEATH DOMAIN-CONTAINING PROTEIN FADD
Paelopatides44515ECTONUCLEOTIDE PYROPHOSPHATASE/PHOSPHODIESTERASE
Paelopatides44516-
Paelopatides44517-
Paelopatides44518-
Paelopatides44519HISTONE-LYSINE N-METHYLTRANSFERASE EGGLESS
Paelopatides44520FASTING-INDUCIBLE INTEGRAL MEMBRANE PROTEIN TM6P1-RELATED
Paelopatides44521SLR5058 PROTEIN
Paelopatides44522E3 UBIQUITIN-PROTEIN LIGASE KCMF1
Paelopatides44523ACTIVATING MOLECULE IN BECN1-REGULATED AUTOPHAGY PROTEIN 1
Paelopatides44524-
Paelopatides44525LOW-DENSITY LIPOPROTEIN RECEPTOR-RELATED PROTEIN 2-RELATED
Paelopatides44526PEPTIDYLPROLYL ISOMERASE
Paelopatides44527KU AUTOANTIGEN DNA HELICASE
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