About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides44568PARANEOPLASTIC ANTIGEN
Paelopatides44569-
Paelopatides44570-
Paelopatides44571REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides44572REVERSE TRANSCRIPTASES
Paelopatides44573-
Paelopatides44574-
Paelopatides44575ULP_PROTEASE DOMAIN-CONTAINING PROTEIN
Paelopatides44576-
Paelopatides44577REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides44578-
Paelopatides44579REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides44580-
Paelopatides44581-
Paelopatides445825'-AMP-ACTIVATED PROTEIN KINASE , BETA SUBUNIT
Paelopatides44583PEROXIREDOXIN
Paelopatides445842-AMINOETHYLPHOSPHONATE--PYRUVATE TRANSAMINASE
Paelopatides44585RETROTRANSPOSON
Paelopatides44586RETROTRANSPOSON
Paelopatides44587PHD-TYPE DOMAIN-CONTAINING PROTEIN
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