About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides44548-
Paelopatides44549ACONITATE HYDRATASE B
Paelopatides44550HEPARAN SULFATE SULFOTRANSFERASE
Paelopatides44551HEPARAN SULFATE SULFOTRANSFERASE
Paelopatides44552-
Paelopatides44553AMINE OXIDASE
Paelopatides44554LEUCINE-RICH REPEAT-CONTAINING
Paelopatides44555PEROXISOMAL 2,4-DIENOYL-COA REDUCTASE
Paelopatides44556IFT140/172-RELATED
Paelopatides44557IFT140/172-RELATED
Paelopatides44558FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Paelopatides44559FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Paelopatides44560FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Paelopatides44561FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Paelopatides44562PA-PL1 PHOSPHOLIPASE FAMILY
Paelopatides44563-
Paelopatides44564BUCENTAUR RELATED
Paelopatides44565BUCENTAUR RELATED
Paelopatides44566OLFACTORY RECEPTOR AND ADENOSINE RECEPTOR
Paelopatides44567PROTEIN CBG26694
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