About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides44588-
Paelopatides44589HAT FAMILY DIMERISATION DOMAINCONTAINING PROTEIN-RELATED
Paelopatides44590ZINC FINGER DHHC DOMAIN CONTAINING PROTEIN
Paelopatides44591-
Paelopatides44592-
Paelopatides44593RUS1 FAMILY PROTEIN C16ORF58
Paelopatides44594FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Paelopatides44595FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Paelopatides44596-
Paelopatides44597ANNEXIN
Paelopatides44598BONUS, ISOFORM C-RELATED
Paelopatides44599-
Paelopatides44600ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
Paelopatides44601ALDO/KETO REDUCTASE
Paelopatides44602PROTEIN CBG16428
Paelopatides44603EPM2A-INTERACTING PROTEIN 1
Paelopatides44604ADP-RIBOSYL CYCLASE
Paelopatides44605LDOC1 RELATED
Paelopatides44606TRANSPOSON TY3-I GAG-POL POLYPROTEIN
Paelopatides44607ENZYMATIC POLYPROTEIN-RELATED
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