About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides44965-
Paelopatides44966PROTEIN CBG26694
Paelopatides44967PROTEIN CBG26694
Paelopatides44968-
Paelopatides44969PROTEIN CBG26694
Paelopatides44970PARANEOPLASTIC ANTIGEN
Paelopatides44971ULP_PROTEASE DOMAIN-CONTAINING PROTEIN
Paelopatides44972-
Paelopatides44973PROTEIN CBG26694
Paelopatides44974PROTEIN CBG26694
Paelopatides44975REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides44976CARNITINE O-ACYLTRANSFERASE
Paelopatides44977CARNITINE O-ACYLTRANSFERASE
Paelopatides44978ALADIN/ADRACALIN/AAAS
Paelopatides44979-
Paelopatides44980SH2-SH3 ADAPTOR PROTEIN-RELATED
Paelopatides44981-
Paelopatides44982FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Paelopatides44983-
Paelopatides44985HETEROGENEOUS NUCLEAR RIBONUCLEOPROTEIN
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