About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides06066PROTEIN CBG26694
Paelopatides06067PROTEIN CBG26694
Paelopatides06068ENDONUCLEASE-RELATED
Paelopatides06073FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Paelopatides06074PIGGYBAC TRANSPOSABLE ELEMENT-DERIVED PROTEIN 4
Paelopatides06077THYMIDYLATE SYNTHASE 1
Paelopatides06078TYROSINE-PROTEIN KINASE RECEPTOR
Paelopatides06079VITELLOGENIN RECEPTOR-LIKE PROTEIN-RELATED-RELATED
Paelopatides06080-
Paelopatides06081PROTEIN CBG26694
Paelopatides06082MAP/MICROTUBULE AFFINITY-REGULATING KINASE
Paelopatides06083MAP/MICROTUBULE AFFINITY-REGULATING KINASE
Paelopatides06084NADH-UBIQUINONE OXIDOREDUCTASE B15 SUBUNIT
Paelopatides06085POLYCOMB PROTEIN
Paelopatides06086POLYCOMB PROTEIN
Paelopatides06087EIF-1A
Paelopatides06088ZINC FINGER PROTEIN 294
Paelopatides06089-
Paelopatides06090CENTROSOMAL PROTEIN OF 85 KDA
Paelopatides06091CENTROSOMAL PROTEIN OF 85 KDA
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