About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides06779-
Paelopatides06780REVERSE TRANSCRIPTASES
Paelopatides06781MULTICOPPER OXIDASE-RELATED
Paelopatides06782-
Paelopatides06783U1 SMALL NUCLEAR RIBONUCLEOPROTEIN C
Paelopatides06786-
Paelopatides06787-
Paelopatides06788CALCIUM-BINDING PROTEIN 8-RELATED
Paelopatides06789CXC DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides06790-
Paelopatides06791-
Paelopatides06792ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
Paelopatides06793-
Paelopatides06794-
Paelopatides06795HEAT SHOCK PROTEIN 70KDA
Paelopatides06796DNA REPLICATION LICENSING FACTOR MCM FAMILY MEMBER
Paelopatides06797CYTOCHROME C OXIDASE ASSEMBLY FACTOR 3, MITOCHONDRIAL
Paelopatides06798ENZYMATIC POLYPROTEIN-RELATED
Paelopatides06799PROTEIN CBG26694
Paelopatides06800-
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