About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides06715ARP2/3 COMPLEX 34 KDA SUBUNIT
Paelopatides06716THIOESTERASE
Paelopatides06717FATTY ACID SYNTHASE
Paelopatides06718FATTY ACID SYNTHASE
Paelopatides06719FATTY ACID SYNTHASE
Paelopatides06720-
Paelopatides06721ULP_PROTEASE DOMAIN-CONTAINING PROTEIN
Paelopatides06722ULP_PROTEASE DOMAIN-CONTAINING PROTEIN
Paelopatides06723PROTEIN DIAPHANOUS
Paelopatides06724L1 TRANSPOSABLE ELEMENT-RELATED
Paelopatides06725IP13529P
Paelopatides06726-
Paelopatides06727-
Paelopatides06728-
Paelopatides06729UNCHARACTERIZED
Paelopatides06730-
Paelopatides06731-
Paelopatides06732PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN
Paelopatides06733-
Paelopatides06734CHARGED MULTIVESICULAR BODY PROTEIN
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