About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides07829-
Paelopatides07830PROTEIN CBG26694
Paelopatides07831MANNOSE, PHOSPHOLIPASE, LECTIN RECEPTOR RELATED
Paelopatides07832-
Paelopatides07833UNCHARACTERIZED
Paelopatides07834PROTEIN CBG26694
Paelopatides07835BONUS, ISOFORM C-RELATED
Paelopatides07836YIPPEE DOMAIN-CONTAINING PROTEIN
Paelopatides07837BONUS, ISOFORM C-RELATED
Paelopatides07838TRACE AMINE-ASSOCIATED RECEPTOR 19N-RELATED
Paelopatides07839PROTEIN CBG12054-RELATED
Paelopatides07840EPM2A-INTERACTING PROTEIN 1
Paelopatides07841EPM2A-INTERACTING PROTEIN 1
Paelopatides07842TRANSPOSON
Paelopatides07843-
Paelopatides07844ZINC KNUCKLE DOMAINCONTAINING PROTEIN-RELATED
Paelopatides07845PROTEIN CBG26694
Paelopatides07846PROTEIN CBG26694
Paelopatides07847NADH-UBIQUINONE OXIDOREDUCTASE B22 SUBUNIT
Paelopatides07848-
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