About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides07806ZGC:195170
Paelopatides07809FCH AND DOUBLE SH3 DOMAINS PROTEIN
Paelopatides07810FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Paelopatides07811FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Paelopatides07812-
Paelopatides07813-
Paelopatides07814E3 UBIQUITIN-PROTEIN LIGASE SIAH2
Paelopatides07815THYROTROPIN-RELEASING HORMONE RECEPTOR
Paelopatides07816-
Paelopatides07817METHYLTRANSFERASE
Paelopatides07818-
Paelopatides07819NEURENSIN 1-RELATED
Paelopatides07821ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
Paelopatides07822GUANYLYL CYCLASE
Paelopatides07823TRANSPOSON TY3-I GAG-POL POLYPROTEIN
Paelopatides07824PROTEIN CBG26694
Paelopatides07825AP ENDONUCLEASE
Paelopatides07826-
Paelopatides07827C2H2-TYPE DOMAIN-CONTAINING PROTEIN
Paelopatides07828-
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