About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides07785RAS-RELATED PROTEIN RAB
Paelopatides07786REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides07787PROTEIN CBG26694
Paelopatides07788-
Paelopatides07789-
Paelopatides07790-
Paelopatides07792-
Paelopatides07793-
Paelopatides07794TRANSPOSON TY3-I GAG-POL POLYPROTEIN
Paelopatides07795-
Paelopatides07796TRANSPOSON
Paelopatides07797FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Paelopatides07798HOMEOBOX PROTEIN HOX
Paelopatides07799CYCLIC NUCLEOTIDE-GATED CATION CHANNEL SUBUNIT A
Paelopatides07800-
Paelopatides07801UNCHARACTERIZED
Paelopatides07802REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides07803-
Paelopatides07804CXC DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides07805AGAP005574-PA
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