About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides07870-
Paelopatides07871-
Paelopatides07872NACHT DOMAIN-CONTAINING PROTEIN
Paelopatides07873TYROSINE-PROTEIN KINASE
Paelopatides07874POL PROTEIN
Paelopatides07875-
Paelopatides07876-
Paelopatides07877BTB/POZ DOMAIN-CONTAINING PROTEIN 9
Paelopatides07878ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
Paelopatides07879ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
Paelopatides07880METHIONINE--TRNA LIGASE
Paelopatides07881METHIONINE--TRNA LIGASE
Paelopatides07882ATP-BINDING TRANSPORT PROTEIN-RELATED
Paelopatides07883BUCENTAUR RELATED
Paelopatides07884-
Paelopatides07885NISCHARIN RELATED
Paelopatides07886G-PROTEIN COUPLED RECEPTOR
Paelopatides07887-
Paelopatides07888POL PROTEIN
Paelopatides07889FIBRINOGEN/TENASCIN/ANGIOPOEITIN
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