About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides07955ZINC KNUCKLE DOMAINCONTAINING PROTEIN-RELATED
Paelopatides07956ZINC KNUCKLE DOMAINCONTAINING PROTEIN-RELATED
Paelopatides07957-
Paelopatides07958-
Paelopatides07959AMINO ACID TRANSPORTER
Paelopatides07960FAS-ASSOCIATING DEATH DOMAIN-CONTAINING PROTEIN FADD
Paelopatides07961RAS-ASSOCIATING DOMAIN-CONTAINING PROTEIN
Paelopatides07962GAG-RELATED PROTEIN
Paelopatides07963DENDRITIC CELL-SPECIFIC TRANSMEMBRANE PROTEIN
Paelopatides07964FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Paelopatides07965REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides07966DED DOMAIN-CONTAINING PROTEIN
Paelopatides07967PROTEIN CBG26694
Paelopatides07968ALPHA-TECTORIN-RELATED
Paelopatides07969PROTEIN CBG26694
Paelopatides07970ENZYMATIC POLYPROTEIN-RELATED
Paelopatides07972-
Paelopatides07973TRANSPOSON
Paelopatides07974N-ACETYLGALACTOSAMINYLTRANSFERASE
Paelopatides07975-
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