About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides07935ENZYMATIC POLYPROTEIN-RELATED
Paelopatides07936POL PROTEIN
Paelopatides07937ZINC KNUCKLE DOMAINCONTAINING PROTEIN-RELATED
Paelopatides07938ZINC KNUCKLE DOMAINCONTAINING PROTEIN-RELATED
Paelopatides07939G-PROTEIN COUPLED RECEPTOR 124-LIKE PROTEIN
Paelopatides07940REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides07941INACTIVE TYROSINE-PROTEIN KINASE 7
Paelopatides07942PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN
Paelopatides07943KRUEPPEL-LIKE TRANSCRIPTION FACTOR
Paelopatides07944SI:CH211-108C17.2-RELATED-RELATED
Paelopatides07945-
Paelopatides07946ZGC:195170
Paelopatides07947CADHERIN-23
Paelopatides07948CADHERIN DOMAIN-CONTAINING PROTEIN
Paelopatides07949CADHERIN DOMAIN-CONTAINING PROTEIN
Paelopatides07950TYROSINE-PROTEIN KINASE
Paelopatides07951AQUAPORIN
Paelopatides07952ALADIN/ADRACALIN/AAAS
Paelopatides07953-
Paelopatides07954PROTEIN CBG26694
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