About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides09848MICROSOMAL GLUTATHIONE S-TRANSFERASE 1
Paelopatides09849EXPRESSED PROTEIN
Paelopatides09850L1 TRANSPOSABLE ELEMENT-RELATED
Paelopatides09851PROTEIN CBG26694
Paelopatides09852PROTEIN CBG26694
Paelopatides09853ENZYMATIC POLYPROTEIN-RELATED
Paelopatides09854SMALL INTEGRAL MEMBRANE PROTEIN 19
Paelopatides09855REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides09856BONUS, ISOFORM C-RELATED
Paelopatides09857CXC DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides09858CXC DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides09859CXC DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides09860ULP_PROTEASE DOMAIN-CONTAINING PROTEIN
Paelopatides09861-
Paelopatides09862HISTIDINE-RICH GLYCOPROTEIN
Paelopatides09863MULTICOPPER OXIDASE-RELATED
Paelopatides09864KINESIN-ASSOCIATED PROTEINS
Paelopatides09865UNCHARACTERIZED
Paelopatides09866DUF3504 DOMAIN-CONTAINING PROTEIN
Paelopatides098675-HYDROXYTRYPTAMINE RECEPTOR
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