About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides09868-
Paelopatides09869REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides09870-
Paelopatides09871-
Paelopatides09872G DOMAIN-CONTAINING PROTEIN
Paelopatides09873ACROSIN-RELATED
Paelopatides09874AP ENDONUCLEASE
Paelopatides09875-
Paelopatides09876-
Paelopatides09877FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Paelopatides09878REVERSE TRANSCRIPTASES
Paelopatides09879ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
Paelopatides09880-
Paelopatides09881REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides09882-
Paelopatides09883CENTROMERE PROTEIN E
Paelopatides09884INTEGRASE CATALYTIC DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides09885-
Paelopatides09886KINESIN-RELATED
Paelopatides09887ENDONUCLEASE-RELATED
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