About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides10316-
Paelopatides10317PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN
Paelopatides10318PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN
Paelopatides10319POL PROTEIN
Paelopatides10320SLR5058 PROTEIN
Paelopatides10321ENDONUCLEASE-RELATED
Paelopatides10322ENZYMATIC POLYPROTEIN-RELATED
Paelopatides10323POL PROTEIN
Paelopatides10324-
Paelopatides10325LIPIN
Paelopatides10326LIPIN
Paelopatides10327NEUROPEPTIDE Y RECEPTOR
Paelopatides10328PULMONARY SURFACTANT-ASSOCIATED PROTEIN A
Paelopatides10329-
Paelopatides10330PROTEIN KINASE DOMAIN-CONTAINING PROTEIN
Paelopatides10331TYROSINE-PROTEIN KINASE RECEPTOR
Paelopatides10332-
Paelopatides10333REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides10334-
Paelopatides10335REVERSE TRANSCRIPTASE
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