About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides10296PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN
Paelopatides10297BCL-2 RELATED
Paelopatides10298AMILORIDE-SENSITIVE SODIUM CHANNEL-RELATED
Paelopatides10299FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Paelopatides10300-
Paelopatides10301TRANSCRIPTASE, PUTATIVE-RELATED-RELATED
Paelopatides10302ECTOPIC P GRANULES PROTEIN 5 HOMOLOG
Paelopatides10303-
Paelopatides10304SPLICING FACTOR 3A SUBUNIT 2
Paelopatides10305SPLICING FACTOR 3A SUBUNIT 2
Paelopatides10306-
Paelopatides10307ASTEROID PROTEIN
Paelopatides10308-
Paelopatides10309-
Paelopatides10310-
Paelopatides10311-
Paelopatides10312SI:CH211-196P9.1-RELATED
Paelopatides10313-
Paelopatides10314LEUCINE RICH REPEAT FAMILY PROTEIN
Paelopatides10315MYND-TYPE DOMAIN-CONTAINING PROTEIN
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