About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides10418REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides10419REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides10420PROTEIN CBG26694
Paelopatides10421PROTEIN CBG26694
Paelopatides10422PROTEIN CBG26694
Paelopatides10423PROTEIN CBG26694
Paelopatides10424PROTEIN CBG26694
Paelopatides10425MACROGLOBULIN / COMPLEMENT
Paelopatides10426MACROGLOBULIN / COMPLEMENT
Paelopatides10427UNCHARACTERIZED
Paelopatides10428HEPARAN SULFATE 2-O-SULFOTRANSFERASE
Paelopatides10429ENDONUCLEASE-RELATED
Paelopatides10430METHYLTRANSFERASE TYPE 11
Paelopatides10431METHYLTRANSFERASE TYPE 11
Paelopatides10433ZINC FINGER DHHC DOMAIN CONTAINING PROTEIN
Paelopatides10434ZINC FINGER CCHC DOMAIN-CONTAINING PROTEIN 7
Paelopatides10436CARBOHYDRATE SULFOTRANSFERASE 15
Paelopatides10437-
Paelopatides10438DEOXYRIBONUCLEASE II
Paelopatides10439-
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