About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides10461ZINC FINGER PROTEIN
Paelopatides10462-
Paelopatides10463VASOHIBIN-1-LIKE ISOFORM X2
Paelopatides10464VASOHIBIN-1-LIKE ISOFORM X2
Paelopatides10465-
Paelopatides10466INOSITOL-TETRAKISPHOSPHATE 1-KINASE
Paelopatides1046726S PROTEASOME REGULATORY SUBUNIT
Paelopatides10468TRANSMEMBRANE PROTEIN
Paelopatides10469POLY A POLYMERASE
Paelopatides10470BERNARDINELLI-SEIP CONGENITAL LIPODYSTROPHY 2 HOMOLOG BSCL2 PROTEIN
Paelopatides10471-
Paelopatides10472TRANSPOSON
Paelopatides10473HOMEOBOX PROTEIN ENGRAILED
Paelopatides10474TUMOR SUSCEPTIBILITY GENE 101 PROTEIN-RELATED
Paelopatides10475DOCKING PROTEIN RELATED
Paelopatides10476ANTIGEN 332, DBL-LIKE PROTEIN-RELATED
Paelopatides10477NUCLEAR PORE COMPLEX PROTEIN NUP205
Paelopatides10478CELL ADHESION MOLECULE
Paelopatides10479TRAFFICKING PROTEIN PARTICLE COMPLEX SUBUNIT 9
Paelopatides10480TRAFFICKING PROTEIN PARTICLE COMPLEX SUBUNIT 9
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