About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides10440REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides10441-
Paelopatides10442-
Paelopatides10443NOTCH LIGAND FAMILY MEMBER
Paelopatides10444-
Paelopatides10445PROTEIN CBG26694
Paelopatides10446PKSB
Paelopatides10447-
Paelopatides10448-
Paelopatides10449ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
Paelopatides10450UNCHARACTERIZED
Paelopatides10451FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Paelopatides10452BYSTIN
Paelopatides10453-
Paelopatides10454PROTEIN CBG26694
Paelopatides10455GPI TRANSAMIDASE COMPONENT PIG-S
Paelopatides10456DDE_TNP_1_7 DOMAIN-CONTAINING PROTEIN
Paelopatides10457PIGGYBAC TRANSPOSABLE ELEMENT-DERIVED PROTEIN 4
Paelopatides10459ACETYL-COENZYME A SYNTHETASE
Paelopatides10460ACETYL-COENZYME A SYNTHETASE
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