About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides10829TRAF3-INTERACTING PROTEIN 1
Paelopatides1083052 KDA REPRESSOR OF THE INHIBITOR OF THE PROTEIN KINASE-LIKE PROTEIN-RELATED
Paelopatides10831-
Paelopatides10832ENDONUCLEASE
Paelopatides10833EARLY GAMETOCYTE ENRICHED PHOSPHOPROTEIN EGXP
Paelopatides10834-
Paelopatides10835AAA DOMAIN-CONTAINING
Paelopatides10836TRANSPOSON
Paelopatides10837TRANSPOSON
Paelopatides10838RIBOSOMAL PROTEIN L13
Paelopatides10839-
Paelopatides10840-
Paelopatides10841-
Paelopatides10842ZGC:195170
Paelopatides10843MANNOSE, PHOSPHOLIPASE, LECTIN RECEPTOR RELATED
Paelopatides10844POL PROTEIN
Paelopatides10845ENZYMATIC POLYPROTEIN-RELATED
Paelopatides10846ENDONUCLEASE-RELATED
Paelopatides10847POL PROTEIN
Paelopatides10848PROTEIN CBG26694
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