About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides10890DNAJ HOMOLOG SUBFAMILY C MEMBER 9
Paelopatides10891RAS-ASSOCIATING DOMAIN-CONTAINING PROTEIN
Paelopatides10892RAS-ASSOCIATING DOMAIN-CONTAINING PROTEIN
Paelopatides10893DNAJ HOMOLOG SUBFAMILY C MEMBER 9
Paelopatides10894EUKARYOTIC TRANSLATION INITIATION FACTOR 4B/4H
Paelopatides10895FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Paelopatides10896-
Paelopatides10897REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides10898REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides10899-
Paelopatides10900RING FINGER PROTEIN-RELATED
Paelopatides10901PATCHED-RELATED
Paelopatides10902ZGC:195170
Paelopatides10903TGF-BETA FAMILY
Paelopatides10904-
Paelopatides10905DOLICHOL PHOSPHATE-MANNOSE BIOSYNTHESIS REGULATORY PROTEIN
Paelopatides10906FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Paelopatides10907MOLTING PROTEIN MLT-4
Paelopatides10908PH DOMAIN-CONTAINING PROTEIN
Paelopatides10909-
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