About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides10870ENZYMATIC POLYPROTEIN-RELATED
Paelopatides10871TRANSPOSON TY3-I GAG-POL POLYPROTEIN
Paelopatides10872-
Paelopatides10873-
Paelopatides10874ANTIGEN 332, DBL-LIKE PROTEIN-RELATED
Paelopatides10875-
Paelopatides10876PROTEIN CBG26694
Paelopatides10877PROTEIN CBG26694
Paelopatides10878EPOXIDE HYDROLASE 1-RELATED
Paelopatides10879MULTICOPPER OXIDASE-RELATED
Paelopatides10880SPROUTY
Paelopatides10881REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides10882REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides10883-
Paelopatides10884ZINC FINGER MYND DOMAIN-CONTAINING PROTEIN 12
Paelopatides10885ARYLSULFATASE
Paelopatides10886REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides10887BUCENTAUR RELATED
Paelopatides10888REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides10889REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
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