About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides10910POLY A -SPECIFIC RIBONUCLEASE/TARGET OF EGR1, MEMBER 1
Paelopatides10911-
Paelopatides10912-
Paelopatides10913G PROTEIN-COUPLED RECEPTOR-RELATED
Paelopatides10914ZINC KNUCKLE DOMAINCONTAINING PROTEIN-RELATED
Paelopatides10915PROTEIN CBG26694
Paelopatides10916PROSTAGLANDIN REDUCTASE
Paelopatides10917-
Paelopatides1091852 KDA REPRESSOR OF THE INHIBITOR OF THE PROTEIN KINASE-LIKE PROTEIN-RELATED
Paelopatides10925-
Paelopatides10926-
Paelopatides10927BICAUDAL D FAMILY MEMBER
Paelopatides10928F5/8 TYPE C DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides10929-
Paelopatides10930-
Paelopatides10931G-PROTEIN COUPLED RECEPTOR
Paelopatides10932COMPLEMENT COMPONENT-RELATED SUSHI DOMAIN-CONTAINING
Paelopatides10933ACID AMIDASE
Paelopatides10934-
Paelopatides10935-
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