About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides12526PROTEIN CBG26694
Paelopatides12527PROTEIN CBG26694
Paelopatides12528-
Paelopatides12529-
Paelopatides12530FRIZZLED
Paelopatides12531EPM2A-INTERACTING PROTEIN 1
Paelopatides12532-
Paelopatides12533BUCENTAUR RELATED
Paelopatides12534ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
Paelopatides12535-
Paelopatides125362-HYDROXYACID DEHYDROGENASE-RELATED
Paelopatides12537BUCENTAUR RELATED
Paelopatides12538REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides12541ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
Paelopatides12542-
Paelopatides12543-
Paelopatides12544PROTEIN CBG26694
Paelopatides12545HYR DOMAIN-CONTAINING PROTEIN
Paelopatides12546SERINE/THREONINE-PROTEIN KINASE PLK
Paelopatides12547ACROSIN-RELATED
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