About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides14207-
Paelopatides14208SI:CH211-196P9.1-RELATED
Paelopatides14209-
Paelopatides14210ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
Paelopatides14212PROTEIN CBG26694
Paelopatides14213-
Paelopatides14214FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Paelopatides14215INHIBITOR OF GROWTH PROTEIN
Paelopatides14216MATRIX METALLOPROTEINASE
Paelopatides14217PARANEOPLASTIC ANTIGEN
Paelopatides14218POL PROTEIN
Paelopatides14219ENDONUCLEASE-RELATED
Paelopatides14220-
Paelopatides14221RNA POLYMERASE II TRANSCRIPTIONAL COACTIVATOR
Paelopatides14222ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
Paelopatides14223DIPHTHINE METHYLTRANSFERASE
Paelopatides14224POL PROTEIN
Paelopatides14225-
Paelopatides14226ENDONUCLEASE
Paelopatides14227DDE_TNP_IS1595 DOMAIN-CONTAINING PROTEIN
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