About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides14228MYND-TYPE DOMAIN-CONTAINING PROTEIN
Paelopatides14229-
Paelopatides14230-
Paelopatides14231-
Paelopatides14232LD02310P
Paelopatides14233-
Paelopatides14234-
Paelopatides14235N-ACETYLGLUCOSAMINE-6-SULFATASE FAMILY MEMBER
Paelopatides14236N-ACETYLGLUCOSAMINE-6-SULFATASE FAMILY MEMBER
Paelopatides14237-
Paelopatides14238SRCR DOMAIN-CONTAINING PROTEIN
Paelopatides14239REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides14240-
Paelopatides14241MICOS COMPLEX SUBUNIT MIC13
Paelopatides14242PROTEASE FAMILY S9B,C DIPEPTIDYL-PEPTIDASE IV-RELATED
Paelopatides14243REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides14244-
Paelopatides14245-
Paelopatides14246-
Paelopatides14247FI04643P-RELATED
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