About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides14587ZINC FINGER, C3HC4 TYPE (RING FINGER) FAMILY PROTEIN
Paelopatides14588REVERSE TRANSCRIPTASES
Paelopatides14589GTPASE, IMAP FAMILY MEMBER-RELATED
Paelopatides14590ENDONUCLEASE-RELATED
Paelopatides14591PROTEIN CBG26694
Paelopatides14592REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides14593-
Paelopatides14594EXODEOXYRIBONUCLEASE III
Paelopatides14595-
Paelopatides14596-
Paelopatides14597-
Paelopatides14600PARANEOPLASTIC ANTIGEN
Paelopatides14601-
Paelopatides14602ETS
Paelopatides14603BUCENTAUR RELATED
Paelopatides14604REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides14605REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides14606XLR/SCP3/FAM9
Paelopatides14607ZGC:195170
Paelopatides14608-
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