About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides16590ANAPHASE-PROMOTING COMPLEX SUBUNIT 2
Paelopatides16591DIMETHYLANILINE MONOOXYGENASE
Paelopatides16592ANTIGEN 332, DBL-LIKE PROTEIN-RELATED
Paelopatides16593WD40 REPEAT PROTEIN
Paelopatides16594APICAL ENDOSOMAL GLYCOPROTEIN PRECURSOR.
Paelopatides16595OVARIAN-SPECIFIC SERINE/THREONINE-PROTEIN KINASE LOK-RELATED
Paelopatides16596-
Paelopatides16598DENN DOMAIN-CONTAINING PROTEIN 4
Paelopatides16599PIGGYBAC TRANSPOSABLE ELEMENT-DERIVED PROTEIN 4
Paelopatides16600-
Paelopatides16601-
Paelopatides16602-
Paelopatides16603PROTEIN CBG26694
Paelopatides16604PHD-TYPE DOMAIN-CONTAINING PROTEIN
Paelopatides16605PHD-TYPE DOMAIN-CONTAINING PROTEIN
Paelopatides16606FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Paelopatides16607DYNEIN HEAVY CHAIN FAMILY PROTEIN
Paelopatides16608ANNEXIN
Paelopatides16609PROTEIN CBG26694
Paelopatides16610-
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