About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides16611-
Paelopatides16612DED DOMAIN-CONTAINING PROTEIN
Paelopatides16613-
Paelopatides16614PROTEIN CBG26694
Paelopatides16615TRANSPOSON TY3-I GAG-POL POLYPROTEIN
Paelopatides16616PHYTANOYL-COA DIOXYGENASE DOMAIN CONTAINING 1
Paelopatides16617UNCHARACTERIZED
Paelopatides16618-
Paelopatides16619-
Paelopatides16620-
Paelopatides16621-
Paelopatides16622COMPLEMENT COMPONENT-RELATED SUSHI DOMAIN-CONTAINING
Paelopatides16623REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides16624-
Paelopatides16625-
Paelopatides16626E3 UBIQUITIN-PROTEIN LIGASE UHRF-RELATED
Paelopatides16627-
Paelopatides16628CYTOKINE RECEPTOR
Paelopatides16630-
Paelopatides16631HAT FAMILY DIMERISATION DOMAINCONTAINING PROTEIN-RELATED
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