About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides16632PROTEIN, PUTATIVE-RELATED
Paelopatides16633REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides16634RECEPTOR-TYPE TYROSINE-PROTEIN PHOSPHATASE
Paelopatides16635SI:CH211-262H13.3-RELATED-RELATED
Paelopatides16636GAG-RELATED PROTEIN
Paelopatides16637PEPTIDYL-PROLYL CIS-TRANS ISOMERASE-RELATED
Paelopatides16638DER1-LIKE PROTEIN, DERLIN
Paelopatides16639-
Paelopatides16640-
Paelopatides16641ZINC FINGER PROTEIN
Paelopatides16644FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Paelopatides16646TRANSPOSON
Paelopatides16647-
Paelopatides16648NETRIN RECEPTOR UNC5
Paelopatides16649-
Paelopatides16650-
Paelopatides16651ULP_PROTEASE DOMAIN-CONTAINING PROTEIN
Paelopatides16653-
Paelopatides16654PROTEIN CBG26694
Paelopatides16655PROTEIN CBG26694
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