About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides16697-
Paelopatides16698-
Paelopatides16699SI:CH211-108C17.2-RELATED-RELATED
Paelopatides16700-
Paelopatides16701ULP_PROTEASE DOMAIN-CONTAINING PROTEIN
Paelopatides16702CXC DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides16703REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides16704-
Paelopatides16705ACYL-MALONYL CONDENSING ENZYME-RELATED
Paelopatides16706SLIT RELATED LEUCINE-RICH REPEAT NEURONAL PROTEIN
Paelopatides16707-
Paelopatides16708AMINO ACID TRANSPORTER
Paelopatides16709NACHT DOMAIN-CONTAINING PROTEIN
Paelopatides16710-
Paelopatides16711ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
Paelopatides16712RAS-ASSOCIATING DOMAIN-CONTAINING PROTEIN
Paelopatides16713RAS-ASSOCIATING DOMAIN-CONTAINING PROTEIN
Paelopatides16714MONOCARBOXYLATE TRANSPORTER
Paelopatides16716CYSTEINE-RICH SECRETORY PROTEIN-RELATED
Paelopatides16717-
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