About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides16759TRANSPORTER
Paelopatides16760PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN
Paelopatides16761-
Paelopatides16762-
Paelopatides16763LOW-DENSITY LIPOPROTEIN RECEPTOR-RELATED PROTEIN 2-RELATED
Paelopatides16764LOW-DENSITY LIPOPROTEIN RECEPTOR-RELATED PROTEIN 2-RELATED
Paelopatides16765NOTCH LIGAND FAMILY MEMBER
Paelopatides16766POL PROTEIN
Paelopatides16767-
Paelopatides16786KIN17 KIN, ANTIGENIC DETERMINANT OF RECA PROTEIN HOMOLOG
Paelopatides16787NETRIN RECEPTOR UNC5
Paelopatides16788PROTEIN KINASE DOMAIN-CONTAINING PROTEIN
Paelopatides16789REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides16790ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
Paelopatides16791-
Paelopatides16792-
Paelopatides16793-
Paelopatides16794REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides16795MAP/MICROTUBULE AFFINITY-REGULATING KINASE
Paelopatides16796ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
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