About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides16818REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides16819-
Paelopatides16820HEPATOMA-DERIVED GROWTH FACTOR-RELATED
Paelopatides16821FI04643P-RELATED
Paelopatides16822FI04643P-RELATED
Paelopatides16823UNCHARACTERIZED
Paelopatides16824RECEPTOR-TYPE TYROSINE-PROTEIN PHOSPHATASE
Paelopatides16825-
Paelopatides16826PIGGYBAC TRANSPOSABLE ELEMENT-DERIVED PROTEIN 4
Paelopatides16827PIGGYBAC TRANSPOSABLE ELEMENT-DERIVED PROTEIN 4
Paelopatides16828-
Paelopatides16829ANK_REP_REGION DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides16830PROTEIN CBG26694
Paelopatides16831-
Paelopatides16832-
Paelopatides16834PARANEOPLASTIC ANTIGEN
Paelopatides16835TRANSIENT RECEPTOR POTENTIAL CHANNEL
Paelopatides16836TRANSIENT RECEPTOR POTENTIAL CHANNEL
Paelopatides16837-
Paelopatides16838BUCENTAUR RELATED
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