About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides16885-
Paelopatides16886HAT FAMILY DIMERISATION DOMAINCONTAINING PROTEIN-RELATED
Paelopatides1688752 KDA REPRESSOR OF THE INHIBITOR OF THE PROTEIN KINASE-LIKE PROTEIN-RELATED
Paelopatides16888DEHYDROGENASE/REDUCTASE (SDR FAMILY) MEMBER 4
Paelopatides16889-
Paelopatides16890PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN
Paelopatides16891TRANSPOSABLE ELEMENT-RELATED
Paelopatides16892-
Paelopatides16893NACHT DOMAIN-CONTAINING PROTEIN
Paelopatides16894REVERSE TRANSCRIPTASES
Paelopatides16895TYROSINE-PROTEIN KINASE
Paelopatides16896BONUS, ISOFORM C-RELATED
Paelopatides16897NETRIN RECEPTOR UNC5
Paelopatides16898-
Paelopatides16899-
Paelopatides16900-
Paelopatides16901-
Paelopatides16902-
Paelopatides16903-
Paelopatides16904REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
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