About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides16839REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides16840-
Paelopatides16841-
Paelopatides16842PROTEIN CBG26694
Paelopatides16843PROTEIN CBG26694
Paelopatides16844PROTEIN CBG26694
Paelopatides16845-
Paelopatides16846SYNTAXIN
Paelopatides16847STATHMIN
Paelopatides16848KREMEN PROTEIN
Paelopatides16849KREMEN PROTEIN
Paelopatides16850SYNAPSE-ASSOCIATED PROTEIN
Paelopatides16851E3 UBIQUITIN-PROTEIN LIGASE NHLRC1-RELATED
Paelopatides16852DNA PRIMASE LARGE SUBUNIT
Paelopatides16853ENOYL-[ACYL-CARRIER-PROTEIN] REDUCTASE, MITOCHONDRIAL
Paelopatides16854ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
Paelopatides16855ZINC KNUCKLE DOMAINCONTAINING PROTEIN-RELATED
Paelopatides16856GAG-RELATED PROTEIN
Paelopatides16857-
Paelopatides16858UNCHARACTERIZED
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