About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides16905PROTEIN CBG26694
Paelopatides16906INTIMAL THICKNESS RECEPTOR-RELATED
Paelopatides16907BONUS, ISOFORM C-RELATED
Paelopatides16908CELL DIVISION CYCLE 16,23,27
Paelopatides16909A-KINASE ANCHOR PROTEIN 14
Paelopatides16910-
Paelopatides16911HILLARIN
Paelopatides16912-
Paelopatides16913-
Paelopatides16914FI04643P-RELATED
Paelopatides16915SCY1-RELATED S/T PROTEIN KINASE-LIKE
Paelopatides16916SHC (SRC HOMOLOGY DOMAIN C-TERMINAL) ADAPTOR HOMOLOG
Paelopatides16917PROTEIN CBG26694
Paelopatides16918FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Paelopatides16919PROTEIN CBG16327
Paelopatides16920ZINC KNUCKLE DOMAINCONTAINING PROTEIN-RELATED
Paelopatides16921PROTEIN CBG26694
Paelopatides16922SI:CH211-196P9.1-RELATED
Paelopatides16923-
Paelopatides16924-
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