About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides17567PROTEIN CBG26694
Paelopatides17568ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
Paelopatides17569-
Paelopatides17571RETROVIRUS-RELATED POL POLYPROTEIN FROM TRANSPOSON 412-LIKE PROTEIN-RELATED
Paelopatides17572REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides17573PROTEIN MAX MYC-ASSOCIATED FACTOR X
Paelopatides17574SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED
Paelopatides17575REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides17576SYNAPTIC ADHESION-LIKE MOLECULE SALM
Paelopatides17577PROTEIN CBG26694
Paelopatides17578ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
Paelopatides17579-
Paelopatides17580REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides17581ALPHA-TECTORIN-RELATED
Paelopatides17582BEN DOMAIN-CONTAINING PROTEIN 6
Paelopatides17583D-XYLOSE-PROTON SYMPORTER-LIKE 2
Paelopatides17584-
Paelopatides17585D-XYLOSE-PROTON SYMPORTER-LIKE 2
Paelopatides17586-
Paelopatides17587XK-RELATED PROTEIN
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