About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides19407-
Paelopatides19408PROPERDIN
Paelopatides19409DNA REPLICATION-RELATED ELEMENT FACTOR, ISOFORM A
Paelopatides19410-
Paelopatides19411UNCHARACTERIZED
Paelopatides19412RNA-BINDING PROTEIN
Paelopatides19413ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
Paelopatides194142-AMINOMUCONIC SEMIALDEHYDE DEHYDROGENASE
Paelopatides19415SINGLE-STRAND SELECTIVE MONOFUNCTIONAL URACIL DNA GLYCOSYLASE
Paelopatides19416SUGAR HYDROLASE-RELATED
Paelopatides19417EPM2A-INTERACTING PROTEIN 1
Paelopatides19418-
Paelopatides19419-
Paelopatides19420-
Paelopatides19421G PROTEIN-COUPLED RECEPTOR-RELATED
Paelopatides19422REVERSE TRANSCRIPTASES
Paelopatides19423GAG-RELATED PROTEIN
Paelopatides19424-
Paelopatides19425-
Paelopatides19426REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
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