About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides19427PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN
Paelopatides19428BUCENTAUR RELATED
Paelopatides19429PROTEIN CBG26694
Paelopatides19430-
Paelopatides19431ENZYMATIC POLYPROTEIN-RELATED
Paelopatides19432ZINC KNUCKLE DOMAINCONTAINING PROTEIN-RELATED
Paelopatides19433TRANSPOSON
Paelopatides19434GAG-RELATED PROTEIN
Paelopatides19435TRANSPOSASE, PUTATIVE-RELATED
Paelopatides19436PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN
Paelopatides19437-
Paelopatides19438REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides19439SERINE/THREONINE-PROTEIN KINASE
Paelopatides19440-
Paelopatides19441-
Paelopatides19442-
Paelopatides19443SPERMATOGENESIS-ASSOCIATED PROTEIN 24
Paelopatides19444POLYADENYLATE-BINDING PROTEIN-INTERACTING PROTEIN 2
Paelopatides19445SI:CH211-196P9.1-RELATED
Paelopatides19446-
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