About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides20218SI:CH211-196P9.1-RELATED
Paelopatides20219ALPHA-2,8-SIALYLTRANSFERASE
Paelopatides20220REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides20221SIGNALING LYMPHOCYTIC ACTIVATION MOLECULE
Paelopatides20222PROTEIN CBG26694
Paelopatides20223PROTEIN CBG26694
Paelopatides20224-
Paelopatides20225REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides20226ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
Paelopatides20227-
Paelopatides20228-
Paelopatides20229PHD-TYPE DOMAIN-CONTAINING PROTEIN
Paelopatides20230RETROTRANSPOSON
Paelopatides20231RETROTRANSPOSON
Paelopatides20232-
Paelopatides20233ENDONUCLEASE-RELATED
Paelopatides20234ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
Paelopatides20235MACROGLOBULIN / COMPLEMENT
Paelopatides20236MACROGLOBULIN / COMPLEMENT
Paelopatides20237-
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