About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides20258TETRASPANIN
Paelopatides20259PROTEIN CBG26694
Paelopatides20260PROTEIN CBG26694
Paelopatides20261HEAT SHOCK PROTEIN HSP-12.2-RELATED
Paelopatides20262HEAT SHOCK PROTEIN HSP-12.2-RELATED
Paelopatides20263-
Paelopatides20264EPM2A-INTERACTING PROTEIN 1
Paelopatides20265-
Paelopatides20266REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides20267-
Paelopatides20268-
Paelopatides20269ZGC:195170
Paelopatides20270PROTEIN CBG26694
Paelopatides20271REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides20272-
Paelopatides20273HOMEOBOX PROTEIN ARISTALESS
Paelopatides20274TRANSLOCON-ASSOCIATED PROTEIN, DELTA SUBUNIT
Paelopatides20275CENTROSOMAL PROTEIN OF 170 KDA
Paelopatides20276-
Paelopatides20277INTERFERON-RELATED DEVELOPMENTAL REGULATOR
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