About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides20278-
Paelopatides20279-
Paelopatides20280-
Paelopatides20281UNCHARACTERIZED
Paelopatides20282TRANSPORT PROTEIN TRAPP
Paelopatides20283ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
Paelopatides20284-
Paelopatides20285TYROSINE-PROTEIN KINASE
Paelopatides20286PROTEIN CBG26694
Paelopatides20287UNCHARACTERIZED
Paelopatides20288HEAT SHOCK 70 KDA PROTEIN 14
Paelopatides20289PROTEIN CBG26694
Paelopatides20290PROTEIN LIAT1
Paelopatides20291DNA-DIRECTED RNA POLYMERASES I, II, AND III SUBUNIT RPABC2
Paelopatides20292F5/8 TYPE C DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides20297-
Paelopatides20298-
Paelopatides20299PROPROTEIN CONVERTASE SUBTILISIN/KEXIN-RELATED
Paelopatides20300PROPROTEIN CONVERTASE SUBTILISIN/KEXIN-RELATED
Paelopatides20301UNCHARACTERIZED
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