About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides20302PROTEIN CBG26694
Paelopatides20303UNCHARACTERIZED
Paelopatides20304DECARBOXYLATING DEHYDROGENASES-ISOCITRATE, ISOPROPYLMALATE, TARTRATE
Paelopatides20305UNCHARACTERIZED
Paelopatides20306SOLUTE CARRIER FAMILY 22 MEMBER
Paelopatides20307-
Paelopatides20308REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides20309-
Paelopatides20310CARBOXYPEPTIDASE REGULATORY REGION-CONTAINING
Paelopatides20311EXPRESSED PROTEIN
Paelopatides20312SEPIAPTERIN REDUCTASE
Paelopatides20313ZGC:195170
Paelopatides203142',3'-CYCLIC-NUCLEOTIDE 3'-PHOSPHODIESTERASE
Paelopatides20315-
Paelopatides20318ZINC FINGER CCHC DOMAIN CONTAINING PROTEIN
Paelopatides20319-
Paelopatides20320-
Paelopatides20321-
Paelopatides20322SET DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides20323SET DOMAIN-CONTAINING PROTEIN-RELATED
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