About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides20346DNA HELICASE RECQ FAMILY MEMBER
Paelopatides20347PROTEIN CBG26694
Paelopatides20348HECT DOMAIN UBIQUITIN-PROTEIN LIGASE
Paelopatides20350GTPASE, IMAP FAMILY MEMBER-RELATED
Paelopatides20351REVERSE TRANSCRIPTASES
Paelopatides20352-
Paelopatides20353-
Paelopatides20354FI21293P1
Paelopatides20355-
Paelopatides20356-
Paelopatides20357ACYL-COA DEHYDROGENASE
Paelopatides20358ACYL-COA DEHYDROGENASE
Paelopatides20359-
Paelopatides20360-
Paelopatides20361-
Paelopatides20362S-METHYL-5'-THIOADENOSINE PHOSPHORYLASE
Paelopatides20363CXC DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides20364CXC DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides20365PROTEIN CBG26694
Paelopatides20366PROTEIN CBG26694
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