About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides20324CXC DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides20325-
Paelopatides20326REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides20328FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Paelopatides20329-
Paelopatides20330-
Paelopatides20331REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides20332ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
Paelopatides20333GAMMA-SECRETASE-ACTIVATING PROTEIN
Paelopatides20334GAMMA-SECRETASE-ACTIVATING PROTEIN
Paelopatides20335-
Paelopatides20336PROTEIN CBG26694
Paelopatides20337PROTEIN CBG26694
Paelopatides20338PROTEIN CBG26694
Paelopatides20339WD REPEAT-CONTAINING PROTEIN 97
Paelopatides20340-
Paelopatides20341RAS-ASSOCIATING DOMAIN-CONTAINING PROTEIN
Paelopatides20342TRANSMEMBRANE PROTEIN 201
Paelopatides2034352 KDA REPRESSOR OF THE INHIBITOR OF THE PROTEIN KINASE-LIKE PROTEIN-RELATED
Paelopatides20345AMNIONLESS
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