About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides21123PROTEIN CBG26694
Paelopatides21124ENZYMATIC POLYPROTEIN-RELATED
Paelopatides21125CGTHBA PROTEIN -14 GENE PROTEIN
Paelopatides21126REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides21127CGTHBA PROTEIN -14 GENE PROTEIN
Paelopatides21128GLUTAMATE DECARBOXYLASE-RELATED
Paelopatides21129-
Paelopatides21130-
Paelopatides21132ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
Paelopatides21133-
Paelopatides21134ET TRANSLATION PRODUCT-RELATED
Paelopatides21135ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
Paelopatides21137PROTEIN CBG26694
Paelopatides21138-
Paelopatides2113952 KDA REPRESSOR OF THE INHIBITOR OF THE PROTEIN KINASE-LIKE PROTEIN-RELATED
Paelopatides21140-
Paelopatides21142REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides21143PROTEIN SSUH2 HOMOLOG
Paelopatides21144-
Paelopatides21145PROTEIN SSUH2 HOMOLOG
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